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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11354897 chr7:72209527 CA/C TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs113574564 chr3:93762544 G/A STX19 chr3:93733213-93747454:- 0.76 5.95 2.28E-7 Box Plot
ACC rs113924466 chr6:86241751 G/GA SNHG5 chr6:86370668-86388454:- 0.69 6.86 8.23E-9 Box Plot
ACC rs114015142 chr2:61351189 T/A C2orf74 chr2:61372203-61391964:+ 0.55 5.47 1.31E-6 Box Plot
ACC rs11417874 chr5:96288857 T/TA ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs114317312 chr2:61351188 T/C C2orf74 chr2:61372203-61391964:+ 0.55 5.47 1.31E-6 Box Plot
ACC rs11445159 chr8:71924270 G/GA XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs114498878 chr2:61351187 T/C C2orf74 chr2:61372203-61391964:+ 0.55 5.47 1.31E-6 Box Plot
ACC rs11450297 chr6:86411921 T/TC SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs1148182 chr10:28616419 A/G MPP7 chr10:28339922-28623415:- 0.5 5.07 5.36E-6 Box Plot
ACC rs114835355 chr3:93554116 C/T STX19 chr3:93733213-93747454:- 0.79 5.58 8.76E-7 Box Plot
ACC rs11486951 chr7:76038153 A/T UPK3B chr7:76139745-76145838:+ 0.72 5.62 7.59E-7 Box Plot
ACC rs11487700 chr1:235322277 C/T RBM34 chr1:235294498-235324772:- 0.66 5.96 2.25E-7 Box Plot
ACC rs11489557 chr7:76036569 G/A UPK3B chr7:76139745-76145838:+ 0.7 5.31 2.28E-6 Box Plot
ACC rs11520962 chr7:76013265 A/G UPK3B chr7:76139745-76145838:+ 0.71 5.5 1.15E-6 Box Plot